Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_42929646_42942231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42929646 - 42942231

Intron Length:

12586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

SIGPVDPINMEYTIDIIFAQ

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

GABRG1

Ensembl Gene ID:

ENSAPLG00000015591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020749

42914958 - 42968956

53999

ENSAPLT00000016265

42914958 - 42969695

54738