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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42942300_42948528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42942300 - 42948528

Intron Length:

6229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AAATATGTAATT

Flanking Amino Acid:

YDNKLRPDIGVRTTVIETDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

0.82

0.8

24.9

Major PPT

77.1

0.61

0.9

77.1

36.9

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

47.3

-0.1

2.1

65.28

39.4

Associated Gene:

Gene:

GABRG1

Ensembl Gene ID:

ENSAPLG00000015591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020749

42914958 - 42968956

53999

ENSAPLT00000016265

42914958 - 42969695

54738