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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43024261_43027034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43024261 - 43027034

Intron Length:

2774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

GCTGACTTAAAT

Flanking Amino Acid:

QDDGTLLYTMRLTVQAECPM

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

0.5

1.1

76.9

32.8

Major PPT

0.77

0.7

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

0.27

1.8

71.06

45.2

Associated Gene:

Gene:

GABRA2

Ensembl Gene ID:

ENSAPLG00000015376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016063

43009776 - 43065206

55431