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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43212277_43213661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43212277 - 43213661

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAATAT

U12 Branch Point Sequence:

CAGTCAGAAAAA

Flanking Amino Acid:

VSSETIKSITGEYIVMTVYF

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

35.3

Major BPS

50.9

0.02

1.1

47.4

35.7

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.6

-1.5

3.3

51.4

45.5

Minor BPS

37.9

-0.9

2.3

46.56

42.8

Associated Gene:

Gene:

GABRA4

Ensembl Gene ID:

ENSAPLG00000011884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027184

43190557 - 43228991

38435

ENSAPLT00000012365

43190557 - 43228991

38435