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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43386092_43387624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43386092 - 43387624

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCAATCTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAATC

Flanking Amino Acid:

QLQDFDWQLKLALSSDKISM

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

69.7

0.44

0.9

61.9

39.6

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

0.73

1.4

82.42

31.4

Associated Gene:

Gene:

COMMD8

Ensembl Gene ID:

ENSAPLG00000011707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024255

43385342 - 43389111

3770

ENSAPLT00000012194

43385342 - 43389439

4098