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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43387778_43388792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43387778 - 43388792

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGGCT

5'SS Class:

strong_major

3'SS Sequence:

ATGATTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ACAGTCATAACT

Flanking Amino Acid:

AVGQNMSDEEAAQQIKELNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.2

37.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

75.3

0.57

0.9

70.1

40.6

Minor 5ss

37.9

-1.4

3.6

56.2

48.2

Minor BPS

52.3

0.15

1.7

67.6

43.1

Associated Gene:

Gene:

COMMD8

Ensembl Gene ID:

ENSAPLG00000011707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024255

43385342 - 43389111

3770

ENSAPLT00000012194

43385342 - 43389439

4098