Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_43409792_43411944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

43409792 - 43411944

Intron Length:

2153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

TGTTTCTAAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TATTACTTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.45

67.2

38.3

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

79.9

0.92

1.4

85.15

32.4

Associated Gene:

Gene:

ATP10D

Ensembl Gene ID:

ENSAPLG00000011330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040724

43409649 - 43443685

34037

ENSAPLT00000039835

43409649 - 43443685

34037