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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43419726_43420828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43419726 - 43420828

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GAGTAATGAAAA

Flanking Amino Acid:

NNDLSRFRGFVEHSNKDRVG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.7

45.7

Major BPS

67.7

0.44

38.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

37.1

-1.5

2.8

43.3

43.7

Minor BPS

43.1

-0.5

1.9

50.65

39.2

Associated Gene:

Gene:

ATP10D

Ensembl Gene ID:

ENSAPLG00000011330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011797

43406675 - 43443871

37197

ENSAPLT00000040724

43409649 - 43443685

34037

ENSAPLT00000039835

43409649 - 43443685

34037

ENSAPLT00000017750

43411945 - 43443685

31741