Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_43437684_43439194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43437684 - 43439194

Intron Length:

1511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGACAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

QLYVMSQKSVAYLPSTFWIT

Intron Amino Acid Position:

1185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

72.9

34.4

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

38.3

-1.3

3.1

45.3

45.2

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

ATP10D

Ensembl Gene ID:

ENSAPLG00000011330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039835

43409649 - 43443685

34037

ENSAPLT00000011797

43406675 - 43443871

37197