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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43583204_43587641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43583204 - 43587641

Intron Length:

4438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGGCC

5'SS Class:

major

3'SS Sequence:

TTTTCTCATCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTTTCTCATCT

Flanking Amino Acid:

AIEEEKRRQQAELEAFENRL

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

59.8

41.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.7

0.8

74.8

35.2

Minor 5ss

42.1

-0.9

3.4

59.5

45.4

Minor BPS

60.5

0.41

1.8

80.8

40.8

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270