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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43587696_43590772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43587696 - 43590772

Intron Length:

3077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTCTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TATGTCTGAACA

Flanking Amino Acid:

CKEMKRKASEIKEAEAKAAI

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

66.9

0.38

1.1

62.4

42.9

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

64.2

0.44

1.5

73.13

38.5

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270