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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43593037_43600476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43593037 - 43600476

Intron Length:

7440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

AGTAACTTACTG

Flanking Amino Acid:

TSCKNQCPKELPCGHRCKEI

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

84.9

0.79

0.7

80.8

31.2

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

47.2

-0.3

1.9

52.48

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270