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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43601517_43603811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43601517 - 43603811

Intron Length:

2295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGA

5'SS Class:

major

3'SS Sequence:

TTTATTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

KINGSADGKKAGPECLQCEE

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

65.9

42.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

0.9

81.3

36.3

Minor 5ss

41.8

-0.9

3.2

55.7

48.5

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270