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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43612923_43614618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43612923 - 43614618

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

TTTGTTTCAACA

Flanking Amino Acid:

DCQKHQCRRKCCSGNCPPCD

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

81.2

0.7

0.9

77.7

35.5

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

62.3

0.38

1.6

74.67

37.4

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270