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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43614742_43615648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43614742 - 43615648

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCA

5'SS Class:

major

3'SS Sequence:

CTTTGCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TTTCCCCTACTT

Flanking Amino Acid:

HRGPCEICRQEVEKQCRCGK

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.3

71.6

40.2

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

72.7

0.51

41.2

Minor 5ss

29.9

-2.3

2.6

34.3

Minor BPS

0.33

82.26

39.1

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270