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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43615774_43616101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43615774 - 43616101

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTCTTTTAATC

Flanking Amino Acid:

GKRSCPCGKSKFTLPCTEDV

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

0.9

71.1

38.7

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

68.3

0.55

1.2

71.9

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044649

43582444 - 43621713

39270

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270

ENSAPLT00000011205

43424863 - 43621713

196851