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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43616217_43617356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43616217 - 43617356

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATTGC

5'SS Class:

major

3'SS Sequence:

CTGAGCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATTACATTCACT

Flanking Amino Acid:

CASPQWQCDQVCGKALPCGN

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

68.2

37.8

Major BPS

73.9

0.59

30.2

Major PPT

71.9

0.49

61.5

44.4

Minor 5ss

-0.4

2.6

61.6

43.3

Minor BPS

56.9

0.3

2.1

80.72

40.5

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270