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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43619402_43620111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43619402 - 43620111

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

ATCTGCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GCATTTATATCT

Flanking Amino Acid:

CIASVKRNQAVWSCCGCFCI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.6

0.53

0.8

70.5

35.6

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

46.6

-0.1

1.8

61.73

42.3

Associated Gene:

Gene:

NFXL1

Ensembl Gene ID:

ENSAPLG00000010735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011205

43424863 - 43621713

196851

ENSAPLT00000044649

43582444 - 43621713

39270

ENSAPLT00000036677

43582444 - 43621713

39270

ENSAPLT00000021169

43582444 - 43621713

39270