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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43627732_43628604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43627732 - 43628604

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

AATTTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTTTAATA

Flanking Amino Acid:

IADMFVRTRTGYLEQGLLVK

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.4

0.48

67.8

42.6

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

70.2

0.63

1.2

71.36

35.3

Associated Gene:

Gene:

CNGA1

Ensembl Gene ID:

ENSAPLG00000010470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010910

43626314 - 43630942

4629