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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43630495_43630835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43630495 - 43630835

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TATCATATAACT

Flanking Amino Acid:

EPGLMDKGENRQRHLPGAFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

69.1

0.48

32.1

Major PPT

69.6

0.44

0.9

61.7

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

55.4

0.25

1.8

77.12

38.5

Associated Gene:

Gene:

CNGA1

Ensembl Gene ID:

ENSAPLG00000010470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010910

43626314 - 43630942

4629