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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43640453_43641024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43640453 - 43641024

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CTTTGCCAAACA

Flanking Amino Acid:

TPLGALSVLISAILSSHFLN

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

81.8

31.1

Major BPS

58.2

0.2

1.1

49.1

Major PPT

0.41

62.9

37.5

Minor 5ss

32.4

-2

2.4

35.7

40.3

Minor BPS

47.3

-0.2

2.4

67.55

44.9

Associated Gene:

Gene:

NIPAL1

Ensembl Gene ID:

ENSAPLG00000026168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027156

43638132 - 43643463

5332