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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43651450_43653476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43651450 - 43653476

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TGATATTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTCTCATTAAAA

Flanking Amino Acid:

VVKVSDFGMARYVIDDEYIS

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

73.2

0.52

0.9

70.6

40.6

Minor 5ss

33.8

-1.8

3.3

46.8

Minor BPS

0.37

1.7

70.99

40.5

Associated Gene:

Gene:

TXK

Ensembl Gene ID:

ENSAPLG00000010285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019935

43648448 - 43663415

14968

ENSAPLT00000010734

43648448 - 43668746

20299