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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43656261_43657802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43656261 - 43657802

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGGT

5'SS Class:

major

3'SS Sequence:

TTGTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAA

U12 Branch Point Sequence:

AATTGGTCAACA

Flanking Amino Acid:

LIQYHRHNAAGLITRLRHPV

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

40.9

Major BPS

60.5

0.26

1.3

63.4

44.3

Major PPT

86.3

0.82

0.8

81.7

30.4

Minor 5ss

-2.2

3.6

47.4

Minor BPS

45.6

-0.3

2.5

63.31

42.7

Associated Gene:

Gene:

TXK

Ensembl Gene ID:

ENSAPLG00000010285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010734

43648448 - 43668746

20299

ENSAPLT00000019935

43648448 - 43663415

14968