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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43661048_43662120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43661048 - 43662120

Intron Length:

1073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTATCCTCAATA

Flanking Amino Acid:

PHWWKARDQHGNEGLIPSNY

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

34.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

86.9

0.83

0.8

85.1

34.9

Minor 5ss

29.3

-2.4

3.3

29.9

43.1

Minor BPS

0.75

1.4

80.87

34.6

Associated Gene:

Gene:

TXK

Ensembl Gene ID:

ENSAPLG00000010285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019935

43648448 - 43663415

14968

ENSAPLT00000010734

43648448 - 43668746

20299