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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43676931_43678475_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43676931 - 43678475

Intron Length:
1545

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGATGGA

5'SS Class:
major

3'SS Sequence:
CTTTGAATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
ATCTCTTGAATT

Flanking Amino Acid:
IIEYHKHNAAGLVTRLRYPV

Intron Amino Acid Position:
315

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.1
65.7
40.5

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
78.6
0.64
0.9
74.6
39

Minor 5ss
30
-2.3
3.4
40.4
45.8

Minor BPS
67.5
0.63
1.4
78.9
37.7

Associated Gene:

Gene:
TEC

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43671550 - 43709126
37577

43670513 - 43708518
38006

43671550 - 43701832
30283