Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_43679675_43680779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43679675 - 43680779

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TGTTGCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TACTATGTAATA

Flanking Amino Acid:

GKKSNNLDQYEWYSRNLNRS

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

71.3

34.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

77.6

0.62

0.9

70.5

39.9

Minor 5ss

33.3

-1.9

3.2

36.5

41.7

Minor BPS

47.7

-0.1

2.1

60.8

39.9

Associated Gene:

Gene:

TEC

Ensembl Gene ID:

ENSAPLG00000009593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046160

43671550 - 43709126

37577

ENSAPLT00000033806

43670513 - 43708518

38006