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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43682223_43683738_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43682223 - 43683738

Intron Length:
1516

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGTACA

5'SS Class:
major

3'SS Sequence:
GCTCTGTTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAAACAT

U12 Branch Point Sequence:
TAAACATGAATC

Flanking Amino Acid:
GCERYNLFENSVVTLPSPMP

Intron Amino Acid Position:
151

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
74.8
35.3

Major BPS
63.2
0.33
1.1
69.6
35.7

Major PPT
74.6
0.55
0.9
68.8
37.1

Minor 5ss
38.2
-1.3
2.7
49.5
40.3

Minor BPS
49.2
-0
1.7
60.11
38.1

Associated Gene:

Gene:
TEC

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43671550 - 43709126
37577

43670513 - 43708518
38006

43671550 - 43701832
30283