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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43746418_43753795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43746418 - 43753795

Intron Length:

7378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CTTCTTATAATT

Flanking Amino Acid:

LIHRLEQTMSALKRQNLYSS

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.9

0.76

0.8

79.7

31.4

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

55.6

0.25

1.6

73.4

Associated Gene:

Gene:

SLAIN2

Ensembl Gene ID:

ENSAPLG00000005671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030349

43736935 - 43760378

23444

ENSAPLT00000005880

43736935 - 43770373

33439