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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43784643_43785132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43784643 - 43785132

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTGTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CATTTGTCAATG

Flanking Amino Acid:

HPRAADLLVKISLWSLLVTL

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

64.9

0.34

1.1

57.7

47.4

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

45.3

-0.5

2.2

51.85

43.3

Associated Gene:

Gene:

SLC10A4

Ensembl Gene ID:

ENSAPLG00000001667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001660

43783570 - 43785648

2079