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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43787229_43787304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43787229 - 43787304

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

CCCCCCAAAACG

Flanking Amino Acid:

YVWCVQGTNKVYFRQFCRTC

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.7

33.5

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

44.1

-0.6

2.8

56.9

47.3

Minor BPS

43.9

-0.6

45.15

46.9

Associated Gene:

Gene:

ZAR1

Ensembl Gene ID:

ENSAPLG00000020654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046891

43786241 - 43787595

1355