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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43832521_43833149_R


Intron Information:

Intron Rank:
37

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43832521 - 43833149

Intron Length:
629

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAACTAAA

5'SS Class:
strong_major

3'SS Sequence:
CCTTTTTTGGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CTGCTTTTAATA

Flanking Amino Acid:
LHLLLHAIFIGFDHCHPEVY

Intron Amino Acid Position:
1631

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.3
0.81
1.1
83.2
30.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.5
0.62
0.9
76.3
32.3

Minor 5ss
40.6
-1.1
2.6
50.9
45.5

Minor BPS
61
0.34
1.3
63.44
37.8

Associated Gene:

Gene:
FRYL

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43793406 - 43889005
95600