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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43855840_43856501_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43855840 - 43856501

Intron Length:
662

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATGTTGT

5'SS Class:
strong_major

3'SS Sequence:
TTTGCCATTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAGTGAA

U12 Branch Point Sequence:
GTTATTGGAACT

Flanking Amino Acid:
TLTDEEAKVIGMSIYYPQVR

Intron Amino Acid Position:
503

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.4
0.9
0.9
80.5
35

Major BPS
64.3
0.35
1.2
55.4
42

Major PPT
81.7
0.71
0.8
78.4
34.7

Minor 5ss
48
-0.2
2.5
67.3
43.8

Minor BPS
47
-0.1
2.1
69.77
41.2

Associated Gene:

Gene:
FRYL

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43793406 - 43889005
95600