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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43976430_43977729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43976430 - 43977729

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGATAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTCTAGTATTT

Flanking Amino Acid:

PTGITDYAVQEPAPLPEEGR

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

75.5

29.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

87.1

0.84

0.8

84.6

Minor 5ss

40.3

-1.1

3.1

55.2

Minor BPS

43.8

-0.3

2.3

69.88

41.5

Associated Gene:

Gene:

OCIAD1

Ensembl Gene ID:

ENSAPLG00000027836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033444

43966603 - 44031107

64505

ENSAPLT00000032174

43966603 - 43978751

12149