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Intron Name: Anas_platyrhynchos_platyrhynchos_4_43996334_43998572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43996334 - 43998572

Intron Length:

2239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTAAAT

U12 Branch Point Sequence:

TCTGCTTTATCC

Flanking Amino Acid:

QTPPPVQVGWPMFYCPSSQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

64.6

0.36

1.3

73.3

39.1

Major PPT

88.1

0.86

0.7

85.5

Minor 5ss

45.1

-0.5

2.9

56.3

47.9

Minor BPS

60.3

0.3

1.7

69.42

42.8

Associated Gene:

Gene:

OCIAD2

Ensembl Gene ID:

ENSAPLG00000026944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036416

43990282 - 43998713

8432