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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44010301_44011645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44010301 - 44011645

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTAATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTATTCTTAATC

Flanking Amino Acid:

CIAAMERIYSGGDKRKQEAN

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

71.5

0.48

0.9

64.2

41.2

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

74.2

0.74

1.2

74.44

36.6

Associated Gene:

Gene:

CWH43

Ensembl Gene ID:

ENSAPLG00000003773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040763

44006085 - 44031107

25023

ENSAPLT00000033117

44006085 - 44031107

25023

ENSAPLT00000003851

44001598 - 44031107

29510