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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44011848_44013051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44011848 - 44013051

Intron Length:

1204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTCTTTGTATCA

Flanking Amino Acid:

PHRGPDPNPYGGTVLLGLAH

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

80.9

0.7

0.9

81.3

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

-0.1

2.2

65.74

41.7

Associated Gene:

Gene:

CWH43

Ensembl Gene ID:

ENSAPLG00000003773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033117

44006085 - 44031107

25023

ENSAPLT00000003851

44001598 - 44031107

29510

ENSAPLT00000040763

44006085 - 44031107

25023