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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44023560_44025753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44023560 - 44025753

Intron Length:

2194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGGGTATT

5'SS Class:

major

3'SS Sequence:

CCAATTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTTTCCCAATT

Flanking Amino Acid:

DFVVAHFGNEEEDLDRKLQA

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.1

71.6

40.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.5

0.6

0.9

72.9

37.1

Minor 5ss

36.1

-1.6

3.2

46.9

42.8

Minor BPS

54.8

0.23

1.9

76.34

40.7

Associated Gene:

Gene:

CWH43

Ensembl Gene ID:

ENSAPLG00000003773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033117

44006085 - 44031107

25023

ENSAPLT00000003851

44001598 - 44031107

29510