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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44027810_44029315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44027810 - 44029315

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTTGTTGAATA

Flanking Amino Acid:

QVPEDIHFNPRFGSYKDGHN

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.2

87.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.5

0.64

0.8

77.8

35.7

Minor 5ss

34.7

-1.7

2.7

42.8

Minor BPS

53.4

0.1

1.9

67.43

39.9

Associated Gene:

Gene:

CWH43

Ensembl Gene ID:

ENSAPLG00000003773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040763

44006085 - 44031107

25023

ENSAPLT00000033117

44006085 - 44031107

25023

ENSAPLT00000003851

44001598 - 44031107

29510