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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4402822_4405170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4402822 - 4405170

Intron Length:

2349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATTACA

Flanking Amino Acid:

ENEHTVQFIQELLGPTWKDF

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

100

1.24

0.5

100

Major PPT

90.4

0.91

0.7

85.2

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

62.1

0.37

1.9

80.12

35.1

Associated Gene:

Gene:

GIMD1

Ensembl Gene ID:

ENSAPLG00000006141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006358

4402549 - 4405874

3326