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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44078268_44079043_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44078268 - 44079043

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACGTTTTCATTT

Flanking Amino Acid:

VLRCDTGNTGGNGVSWWTPK

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

74.1

38.3

Major BPS

100

1.24

0.5

100

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

33.2

-1.9

2.9

42.2

Minor BPS

45.6

-0.2

1.7

57.16

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030159

44075539 - 44083173

7635