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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44103708_44105918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44103708 - 44105918

Intron Length:

2211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

ATGTCTTATACT

Flanking Amino Acid:

GIDGELFSETKYHRSLDSDF

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

85.5

0.8

79.9

32.2

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

52.9

0.17

73.68

43.4

Associated Gene:

Gene:

SPATA18

Ensembl Gene ID:

ENSAPLG00000003130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003182

44091940 - 44107294

15355