Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_44265736_44266589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44265736 - 44266589

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACATGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTGTTTTTACTT

Flanking Amino Acid:

INEHYFGLVNFGNTCYCNSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

74.6

0.55

70.8

39.4

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

63.3

0.5

1.6

78.42

39.1

Associated Gene:

Gene:

USP46

Ensembl Gene ID:

ENSAPLG00000003005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003058

44253696 - 44276539

22844

ENSAPLT00000024886

44249645 - 44277011

27367