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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44266671_44276038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44266671 - 44276038

Intron Length:

9368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCGA

5'SS Class:

major

3'SS Sequence:

CCTCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCTACATTAATT

Flanking Amino Acid:

LPWRTEPTSRGTNASALEKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.5

45.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.7

0.71

0.7

80.6

24.7

Minor 5ss

29.7

-2.3

3.2

30.2

42.9

Minor BPS

67.6

0.63

1.6

81.97

39.5

Associated Gene:

Gene:

USP46

Ensembl Gene ID:

ENSAPLG00000003005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003058

44253696 - 44276539

22844