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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44513779_44516511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44513779 - 44516511

Intron Length:

2733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

GTTAAGTTAACT

Flanking Amino Acid:

EAAENGVAKTKVTEAEDDSD

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

66.1

35.6

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

88.9

0.87

0.6

85.2

22.1

Minor 5ss

46.2

-0.4

2.5

46.6

Minor BPS

54.3

0.21

2.3

78.89

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039333

44510807 - 44540449

29643

ENSAPLT00000017943

44510392 - 44554389

43998

ENSAPLT00000003131

44510392 - 44554566

44175

ENSAPLT00000041552

44509397 - 44554574

45178