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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44516616_44518777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44516616 - 44518777

Intron Length:

2162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TAATTTCTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATT

Flanking Amino Acid:

GDIKTGAPQYSYGAAPVNLN

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.6

0.51

1.1

76.4

37.5

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041552

44509397 - 44554574

45178

ENSAPLT00000039333

44510807 - 44540449

29643

ENSAPLT00000017943

44510392 - 44554389

43998

ENSAPLT00000003131

44510392 - 44554566

44175