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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44518843_44519895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44518843 - 44519895

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AACTTTCTAACT

Flanking Amino Acid:

TGGRAYSSSSGVKVKGVDLD

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

79.8

0.67

0.9

75.7

32.9

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

56.9

0.29

1.6

71.61

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039333

44510807 - 44540449

29643

ENSAPLT00000017943

44510392 - 44554389

43998

ENSAPLT00000003131

44510392 - 44554566

44175

ENSAPLT00000041552

44509397 - 44554574

45178