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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44571248_44575748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44571248 - 44575748

Intron Length:

4501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCGA

5'SS Class:

major

3'SS Sequence:

CCTCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TCACCCTGTACC

Flanking Amino Acid:

SPESAAHLIQASEKQVHFVV

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

61.5

44.7

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

74.6

0.55

0.7

68.7

24.9

Minor 5ss

35.1

-1.7

2.7

42.2

44.3

Minor BPS

50.3

-0

1.8

62.11

42.7

Associated Gene:

Gene:

LNX1

Ensembl Gene ID:

ENSAPLG00000003420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018078

44556073 - 44632418

76346

ENSAPLT00000003484

44556010 - 44632890

76881

ENSAPLT00000027814

44556073 - 44632418

76346