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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44576121_44577986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44576121 - 44577986

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

CTCTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGCTGATTT

Flanking Amino Acid:

RLLPGDMILKVNGMDIKNVP

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.5

37.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

81.8

0.71

0.7

72.9

31.9

Minor 5ss

35.3

-1.7

3.5

49.3

47.2

Minor BPS

46.3

-0.2

2.1

65.23

45.5

Associated Gene:

Gene:

LNX1

Ensembl Gene ID:

ENSAPLG00000003420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027814

44556073 - 44632418

76346

ENSAPLT00000018078

44556073 - 44632418

76346

ENSAPLT00000003484

44556010 - 44632890

76881