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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44618307_44621650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

44618307 - 44621650

Intron Length:

3344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

CAATCCAGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

81.9

0.72

0.7

76.6

25.6

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

0.09

1.8

63.92

41.5

Associated Gene:

Gene:

LNX1

Ensembl Gene ID:

ENSAPLG00000003420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027814

44556073 - 44632418

76346

ENSAPLT00000018078

44556073 - 44632418

76346