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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44622384_44632275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

44622384 - 44632275

Intron Length:

9892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTTCA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATCACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

37.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

36.9

-1.5

2.8

46.2

42.2

Minor BPS

47.6

-0.2

2.1

63.51

42.4

Associated Gene:

Gene:

LNX1

Ensembl Gene ID:

ENSAPLG00000003420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027814

44556073 - 44632418

76346

ENSAPLT00000018078

44556073 - 44632418

76346